Publications

Comprehensive analysis of single cell ATAC-seq data with SnapATAC

Published in Nature communications, 2021

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Recommended citation: Fang, Rongxin, Preissl, Sebastian, Li, Yang, Hou, Xiaomeng, Lucero, Jacinta, Wang, Xinxin, Motamedi, Amir, Shiau, Andrew K, Zhou, Xinzhu, Xie, Fangming, ..., Ren, Bing "Comprehensive analysis of single cell ATAC-seq data with SnapATAC." Nature communications, 2021.

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Published in Nature, 2021

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Recommended citation: Yao, Zizhen, Liu, Hanqing, Xie, Fangming, Fischer, Stephan, Adkins, Ricky S, Aldridge, Andrew I, Ament, Seth A, Bartlett, Anna, Behrens, M Margarita, ..., Li, Yang Eric, ..., Zeng, Hongkui & Mukamel Eran A. "A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex." Nature, 2021.

An atlas of gene regulatory elements in adult mouse cerebrum

Published in Nature, 2021

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Recommended citation: Li, Yang Eric, Preissl, Sebastian, Hou, Xiaomeng, Zhang, Ziyang, Zhang, Kai, Qiu, Yunjiang, Poirion, Olivier B, Li, Bin, Chiou, Joshua, Liu, Hanqing, others, "An atlas of gene regulatory elements in adult mouse cerebrum." Nature, 2021.

Recurrently deregulated lncRNAs in hepatocellular carcinoma

Published in Nature communications, 2017

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Recommended citation: Yang, Yang, Chen, Lei, Gu, Jin, Zhang, Hanshuo, Yuan, Jiapei, Lian, Qiuyu, Lv, Guishuai, ..., Li, Yang, ..., Zhang, Michael Q. & Lu, Zhi John "Recurrently deregulated lncRNAs in hepatocellular carcinoma." Nature communications, 2017.

Diversification of rhacophorid frogs provides evidence for accelerated faunal exchange between India and Eurasia during the Oligocene

Published in Proceedings of the National Academy of Sciences, 2013

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Recommended citation: Jia-Tang Li, Yang Li, Sebastian Klaus, Ding-Qi Rao, David Hillis, Ya-Ping Zhang, "Diversification of rhacophorid frogs provides evidence for accelerated faunal exchange between India and Eurasia during the Oligocene." Proceedings of the National Academy of Sciences, 2013.